Opensource computer programs and example calculation templates:

    Preprint Achives (before peer-review):

    • Hanbin Mao, Jixin Chen, Quality Research Follows the Power Law. ChemRxiv 2022, DOI: 10.26434/chemrxiv-2022-1tjgt
    • Jixin Chen, Why the Reaction Order of a Bimolecular Reaction Should be 2.33 Instead of 2?. ChemRxiv 2022, DOI: 10.26434/chemrxiv-2022-fdt7c
    • Dylan Smith, Kristin Lauro, Dymond Kelly, Joel Fish, Emma Lintelman, David McEwen, Corrin Smith, Max Stecz, Tharushi Ambagaspitiya, Jixin Chen. Teaching undergraduate physical chemistry lab with kinetic analysis of COVID-19 in the United States. ChemRxiv (2022). https://doi.org/10.26434/chemrxiv-2022-3jv2h
    • M. Götz et al. Inferring kinetic rate constants from single-molecule FRET trajectories – a blind benchmark of kinetic analysis tools. bioRxiv (2021). https://doi.org/10.1101/2021.11.23.469671
    • Kelle Hart, Chelsea Thompson, Clay Burger, Dylan Hardwick, Amanda Michaud, Abdul HM Al Bulushi, Cole Pridemore, Carson Ward, Jixin Chen. Remote Learning of COVID-19 Kinetic Analysis in a Physical Chemistry Laboratory Class. ChemRxiv 2021, DOI: 10.33774/chemrxiv-2021-gsckv
    • Jixin Chen, Rethinking the Boundary Conditions in the Particle-in-a-Box Mind Experiment. CehmRxiv 2021, DOI: 10.26434/chemrxiv.14384354.v3
    • Jixin Chen, Stochastic Adsorption of Diluted Solute Molecules at an Interface. ChemRxiv 2020, DOI:10.26434/chemrxiv.12402404.v2
    • Juvinch R. Vicente ,Ali Rafiei Miandashti ,Kurt Waldo E. Sy Piecco ,Joseph R. Pyle ,Martin E. Kordesch ,Jixin Chen, Single Oxygen Molecule Sensitivity of Organolead Halide Perovskite Photoluminescence. ChemRxiv 2019, DOI:10.26434/chemrxiv.7666292.v1
    • Juvinch R. Vicente, Jixin Chen, Phase-Segregation and Photothermal Remixing of Mixed-Halide Lead Perovskites. ChemRxiv 2019, DOI:10.26434/chemrxiv.11387091.v1
    • Lei Wang,Joseph Pyle, Jixin Chen, Charge Transfer Initializes Photoexcited YOYO-1 Intramolecular Rotation and Fluorescent Quenching. ChemRxiv 2017, DOI:10.26434/chemrxiv.5531038.v1

    PEER-REVIEWED ARTICLES

    Work done after joining Ohio University (OU) with OU students (*corresponding authors):

    1. Hanbin Mao*, Jixin Chen*, Quality Research Follows the Power Law. Journal of Scientometric Research 2023, in press. preprint: ChemRxiv 2022, DOI: 10.26434/chemrxiv-2022-1tjgt
      Prof. Hanbin Mao at Kent State University and Chen analyzed the citation data in an online database of world top 2% scientists . They have proposed some interesting suggestions in evaluating publication quality and how to maximize the scholarship impact by limiting productivity, a counter intuitive finding to the common belief.
    2. Dinesh Gautam, Srijana Pandey, Jixin Chen*, Effect of Flow Rate and Ionic Strength on the Stabilities of YOYO-1 and YO-PRO-1 Intercalated in DNA Molecules. J. Phys. Chem. B 2023, 127(11), 2450-2456. https://doi.org/10.1021/acs.jpcb.3c00777.
      Dinesh measured the dynamics of YOYO-1 desorbing from DNA under flow. Just like wind can blow away papers in a folder, buffer flow can wash away staining dyes intercalated in a DNA. We thank NIH National Human Genome Research Institute and program officer Dr. Michael Smith for funding support .
    3. Jixin Chen*, Why Should the Reaction Order of a Bimolecular Reaction be 2.33 Instead of 2? J. Phys. Chem. A 2022,126, 51, 9719–9725. https://doi.org/10.1021/acs.jpca.2c07500.
      Chen proposed a new mechanism to predict the reaction rate of a general bimolecular reaction under diluted conditions when diffusion is involved. This is a fundamental challenge in almost all fields across chemistry, physics, materials, and engineering. Chen hopes the community to reinvestigate theories in reaction kinetics. Chen thanks NIH National Human Genome Research Institute and program officer Dr. Michael Smith for funding support .
    4. Markus Götz, Anders Barth, Søren S-R Bohr, Richard Börner, Jixin Chen, Thorben Cordes, Dorothy A Erie, Christian Gebhardt, Mélodie CAS Hadzic, George L Hamilton, Nikos S Hatzakis, Thorsten Hugel, Lydia Kisley, Don C Lamb, Carlos de Lannoy, Chelsea Mahn, Dushani Dunukara, Dick de Ridder, Hugo Sanabria, Julia Schimpf, Claus AM Seidel, Roland KO Sigel, Magnus Berg Sletfjerding, Johannes Thomsen, Leonie Vollmar, Simon Wanninger, Keith R Weninger, Pengning Xu, Sonja Schmid. A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories. Nature Communications 2022, 13, 5402. https://doi.org/10.1038/s41467-022-33023-3.
      Chen contributed to a global effort in testing various of data analysis methods for single-molecule Förster resonance energy transfer (smFRET), a powerful technique to measure molecular interaction kinetics under either equilibrium or nonequilibrium conditions in chemistry, biochemistry, biology, physics, engineering, and various industrial fields. Chen developed postFRET and helped the development of STaSI. Chen thanks NIH National Human Genome Research Institute and program officer Dr. Michael Smith for funding support in developing postFRET .
    5. Dylan K Smith, Kristin Lauro, Dymond Kelly, Joel Fish, Emma Lintelman, David McEwen, Corrin Smith, Max Stecz, Tharushi D Ambagaspitiya, Jixin Chen*. Teaching undergraduate physical chemistry lab with kinetic analysis of COVID-19 in the United States. Journal of Chemical Education 2022, 99(10), 3471-3477. https://doi.org/10.1021/acs.jchemed.2c00416 . 7 coauthors are undergraduate students.
      Undergraduate students in our Physical Chemistry Lab class practice COVID-19 kinetic analysis and predict its trends. News report: Chemistry lab students predict spread of COVID-19 with kinetics models. We thank NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting undergraduate teaching at Ohio University.

      News reports:

      Chemistry lab students predict spread of COVID-19 with kinetics models , Ohio University News Other 7 News reports
    6. Annik Bernhardt, Tharushi D Ambagaspitiya, Martin E Kordesch, Katherine Leslee A Cimatu, Jixin Chen*. In-situ ellipsometry measurements on the halide phase segregation of mixed halide lead perovskites. ChemPhysChem 2022, 23(15), e202200022. https://doi.org/10.1002/cphc.202200022  .
      Use ellipsometry for in situ measuring the reversible phase separation of perovskite thin films.
    7. Juvinch R. Vicente, Wojciech M. Jadwisienczak, Savas Kaya, Jixin Chen*. Influence of Lead Source on the Film Morphology of Perovskites Spin-Coated on Planar and Mesoporous Architectures under Ambient Conditions. J. Electr. Mater. 2022, 51, 1623-1631. https://doi.org/10.1063/5.0064140  .
      Compare the effect of chemical precusors on device efficiency for perovskite solar cells made outside of grovebox.
    8. Jixin Chen*. Simulating stochastic adsorption of diluted solute molecules at interfaces. AIP Advances 2022, 12 (1), 015318. https://doi.org/10.1063/5.0064140  . An example calculation in Excel
      A discrete interpretation of diffusion and adsorption with Monte Carlo simulations of adsorption of diluted solute molecules on interfaces in systems such as self-assembled monolayers and typical biosensing platforms. Adsorption is an important step to predict reaction kinetics on various surfaces. We thank NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting fundamental research at Ohio University.

      News reports:

      Ohio University chemist explains an old question with a modern tool , Ohio University News. Other news report.
    9. Kelle Hart, Chelsea Thompson, Clay Burger, Dylan Hardwick, Amanda Michaud, Abdul HM Al Bulushi, Cole Pridemore, Carson Ward, Jixin Chen*. Remote Learning of COVID-19 Kinetic Analysis in a Physical Chemistry Laboratory Class. ACS Omega . 2021, 6(43), 29223-29232. https://pubs.acs.org/doi/abs/10.1021/acsomega.1c04842 Open Access. The first 8 co-authors are undergraduate students.
      Undergraduate students in the Physical Chemistry Laboratory course of spring 2021 at Ohio University carried out computer simulations for COVID-19 spreading speed and reported the laboratory protocol in ACS Omega . We thank NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting undergraduate teaching at Ohio University.

      News reports:

      Chemistry lab students predict spread of COVID-19 with kinetics models
    10. Juvinch R. Vicente, Martin E. Kordesch, Jixin Chen*, Stabilization of mixed-halide lead perovskites under light by photothermal effects. Journal of Energy Chemistry . 2021, 63, 8-11. https://www.sciencedirect.com/science/article/abs/pii/S2095495621004691

      free access till 11/8/2021 at: ScienceDrect.com

      Spectro-microscopic measurements of mixed-halide lead perovskites under light with temperature control/tuning give some interesting results of phase separation and thermal remixing on this film. Collaborated with Prof. Martin Kordesch at Ohio University .
    11. Flavia PN Inbanathan, Pawan Kumar, Kiran Dasari, Ram S Katiyar, Jixin Chen, Wojciech M Jadwisienczak, Ellipsometry Study of CdSe Thin Films Deposited by PLD on ITO Coated Glass Substrates. Materials . 2021, 14 (12), 3307. https://www.mdpi.com/1996-1944/14/12/3307
      Growth and characterization of CdSe thin film on ITO surface using PLD method. Collaborated with and led by  Prof. Wojciech Jadwisienczak at Ohio University .
    12. Ming-Ho Liu, Tzu-Chun Chen, Juvinch R Vicente, Chun-Nien Yao, Yu-Chi Yang, Chuan-Pin Chen, Pin-Wen Lin, Yu-Chieh Ho, Jixin Chen, Shu-Yi Lin, Yang-Hsiang Chan, Cyanine-Based Polymer Dots with Long-Wavelength Excitation and Near-Infrared Fluorescence beyond 900 nm for In Vivo Biological Imaging. ACS Applied Bio Materials . 2020, 3 (6), 3846-3858. https://pubs.acs.org/doi/abs/10.1021/acsabm.0c00417
      Polymer dots for bioimaing at the near-infrared region. Collaborated with and led by  Prof. Yang-Hsiang Chan at National Chiao Tung University, Taiwan .
    13. Juvinch R Vicente, Jixin Chen*, Phase Segregation and Photothermal Remixing of Mixed-Halide Lead Perovskites. J. Phys. Chem. Lett. 2020, 11(5), 1802-1807.   https://doi.org/10.1021/acs.jpclett.9b03734
      The fast phase segregation and remixing of mixed halid lead perovskite is measured in Chen's goup with time resolution of tens of millisecond.

      News reports:

      Ohio University Chemists Discover a Surprisingly Fast Phase Change in a Material for Solar Cells.
    14. Kristina Shrestha, Juvinch R Vicente, Ali Rafiei Miandashti, Jixin Chen, Hugh H Richardson, Time-resolved temperature-jump measurements and steady-state thermal imaging of nanoscale heat transfer of gold nanostructures on AlGaN:Er3+ thin films.   J. Chem. Phys. 2020, 152 (3), 034706. ( link )
      A new thermal imaging technique is developed to measure the temperature profile of a thin film coated with a thin layer of temperature sensing material. Collaborated with Prof. Hugh Richardson 's group at Ohio University.
    15. Kurt Waldo E. Sy Piecco, Juvinch R. Vicente, Joseph R. Pyle, David C. Ingram, Martin E. Kordesch, Jixin Chen*, Reusable Chemically-Micropatterned Substrates via Sequential Photoinitiated Thiol-Ene Reactions as Template for Perovskite Thin-Film Microarrays. ACS Appl. Electron. Mater. 2019, 1(11), 2279-2286.   DOI: 10.1021/acsaelm.9b00457 . ChemRxiv link
      A method to use thiol-ene click chemistry to functionalize glass and conductive FTO glass surfaces with patterns of different wettability to water and organic solvents. These substrate were applied to immobilization of DNA, and making perovskite microarrays. We thank NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting fundamental research at Ohio University.
    16. Joseph R. Pyle, Kurt Waldo E. Sy Piecco, Juvinch R. Vicente, Jixin Chen*, In-situ Sensing of Reactive Oxygen Species on Dye-Stained Single DNA Molecules under Illumination. Langmuir , 2019,35, 35, 11308-11314. ( link )
      Detecting and super-resolve the reactive oxygen species (ROS) near a single dye-labeled DNA molecule. ROS is "a necessary evil" in many biological systems. Detecting them in situ is important and interesting to many biological studies. This is a paper to prove that a small fraction of ROS can be super-localized even giving the diffusive nature of them. We thank NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting fundamental research at Ohio University.
    17. William Lum, Dinesh Gautam, Jixin Chen, Laura B. Sagle, Single Molecule Protein Patterning Using Hole Mask Colloidal Lithography. Nanoscale , 2019, 11,16228-16234. ( link )
      Surface patterning of single streptavidin molecules in a small patterned area on a glass surface using hole mask colloidal lithography. The project collaborated and led by Prof. Laura Sagle at the University of Cincinnati. Chen thanks NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting research at Ohio University.
    18. Juvinch R. Vicente, Ali Rafiei Miandashti, Kurt Sy Piecco, Joseph R. Pyle, Martin E. Kordesch, Jixin Chen*,  Single-Particle Organolead Halide Perovskite Photoluminescence as a Probe for Surface Reaction Kinetics . ACS Applied Matierals & Interfaces ,  2019, 11(19), 18034-18043. ( link )  ( ChemRxiv , 2019, DOI: 10.26434/chemrxiv.7666292.v1. ( link ) Media report: OU news .
      A mechanistic study of single-particle photoluminescence of perovskite nanorods. A kinetic model is proposed to explain the effect of the adsorption of oxygen molecules on the photoblinking of perovskite nanorods. A concept, photo-knockout , if proposed to distinguish from the traditional photobleaching effect.

      News reports:

      OHIO Researchers Characterize Surface Defect States for Solar Device Development , Ohio University News.
    19. Kurt W. Sy Piecco, Ahmed M. Aboelenen, Joseph R. Pyle, Juvinch R. Vicente, Dinesh Gautam, Jixin Chen*, Kinetic Model under Light-limited Condition for Photo-Initiatied Thiol-Ene Coupling Reactions. ACS Omega ,  2018, 3(10), 14327-14332. ( link , pdf open access )
      An approximation to analyze the reaction rate constants of click chemistry under initiator-limited condition which explains the induction periods of the rate curves. Chen thanks NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting research at Ohio University.
    20. Jeeranan Nonkumwong, Kurt W. Sy Piecco, Uvinduni I. Premadasa, Ahmed M. Adoelenen, Andrew Tangonan, Jixin Chen, Laongnuan Srisombat, Katherine, L. A. Cimatu, Successive Surface Reactions on Hydrophilic Quartz for Modified Magnetic Nanoparticle Attachment Probed by Sum Frequency Generation Spectroscopy. Langmuir , 2018, 34(43), 12680-12693. ( link ) Media report: OU News
      An SFG study on the immobilization and surface functionalization of magnetic nanoparticles. Collaborated with and led by  Prof. Cimatu at Ohio University .

      News reports:

      Chemistry Researchers Collaborate With Thai Colleagues on Surface Reactions for Modified Magnetic Nanoparticle Attachment , Ohio University News.
    21. Wei-Kai TSai, Chun-I Wang, Chia-Hsien Liao, Tsai-Jhen Kuo, Ming-Ho Liu, Cho-Ping Hsu, Shu-Yi Lin, Chang-Yi Wu, Joseph R. Pyle, Jixin Chen, Yang-Hsiang Chan. Molecular Design of Near-Infrared Fluorescent Pdots for Tumor Targeting: AggregationInduced Emission versus Anti-Aggregation-Caused Quenching. Chemical Science , 2019, 10, 198-207. ( link )
      A mechanistic study of very bright polymer dots for near infrared fluorescence imaging with demonstrations of in vivo cancer tumor imaging. Collaborated with and led by  Prof. Yang-Hsiang Chan at National Chiao Tung University, Taiwan .
    22. Lei Wang, Joseph R. Pyle, Katherine L. A. Cimatu,* Jixin Chen,* Ultrafast transient absorption spectra of photoexcited YOYO-1 molecules call for additional investigations of their fluorescence quenching mechanism . J. Photochem. Photobiol. A: Chem. , 2018, 367, 411-419. ( link ) ( pdf ) Media report: OU News
      A mechanistic study of fluorescence quenching of a typical cyanine dye in solutions reveals surprising results that challenge the established rotational relaxation pathways in such a molecule. Collaborated with Prof. Cimatu at Ohio University Chen thanks NIH National Human Genome Research Institute and program officer Dr. Michael Smith for supporting research at Ohio University.

      News reports:

      Chen Offers an Unusual Mechanism of Florescence Quenching , Ohio University News.
    23. Gregory J. Deye, Juvinch R. Vicente, Jixin Chen, Jacob W. Ciszek, The Influence of Defects on the Reactivity of Organic Surfaces. J. Phys. Chem. C . 2018, 122(27), 15582-15587. ( link )
      A report indicates that the orientation of the crystal surface of the organic materials does affect the reactivity of the surface to a functional molecule. This research is motivated by developing a better interface for organic thin-film transistor device. Collaborated with and led by  Prof. Jake Ciszek at Loyola University at Chicago .
    24. Juvinch R. Vicente, Jixin Chen,* Perovskite Solar Cells. Encyclopedia of Chemical Processing, published by Taylor & Francis, 2018, DOI: 10.1081/E-ECHP-140000328. Book chapter, in press ( preprint ).
      A mini review about the progress and challenges of perovskite solar cells.
    25. Joseph R. Pyle, Kurt W.E. Sy Piecco, Juvinch R. Vicente, Jixin Chen,* Optical Genome Mapping. Encyclopedia of Chemical Processing , published by Taylor & Francis, 2018, DOI: 10.1081/E-ECHP-140000148. Book chapter, in press( preprint ).
      A mini review about the history, progress, and challenges in genome optical mapping.
    26. Joseph R. Pyle, Jixin Chen,* Photobleaching of YOYO-1 in Super-Resolution Single-DNA Fluorescence Imaging. BJNano . 2017, 8, 2296-2306. doi:10.3762/bjnano.8.229. ( link , pdf open access )
      A method to predict the best experimental conditions for PAINT, a super-resolution optical nanoscopy. The idea is to predict and balance the stochastic absorption and the photobleaching rates of the organic dye molecules. The hitting rate of a molecule to another molecule within time Δt is expressed with the above equation.

      News reports:

      NQPI | Jixin Chen Fine-tunes Nanoscale Imaging Procedure , Ohio University News.
    27. Gregory Deye, Juvinch R. Vicente, Shawn M. Dalke, Selma Piranej, Jixin Chen, Jacob W. Ciszek, The Role of Thermal Activation and Molecular Structure on the Reaction of Molecular Surfaces. Langmuir 2017, 33(33), 8140-8146 ( link ) Media report: OU News
      An early study of the surface reactivity of pentacene thin film. Collaborated with and led by  Prof. Jake Ciszek at Loyola University at Chicago .
    28. Chi-Shiang Ke, Chia-Chia Fang, Jia-Ying Yan, Po-Jung Tseng, Joseph R. Pyle, Chuan-Pin Chen, Shu-Yi Lin, Jixin Chen, Xuanjun Zhang, Yang-Hsiang Chan, Molecular Engineering and Design of Semiconducting Polymer Dots with Narrow-Band, Near-Infrared Emission for in Vivo Biological Imaging. ACS Nano 2017, 11(3), 3166-3177 ( link ) Media report: OU News
      Synthesis and characterization of a group of near infrared polymer dyes. Collaborated with and led by  Prof. Yang-Hsiang Chan at National Chiao Tung University, Taiwan .
    29. Jixin Chen,* Joseph R Pyle, Kurt Waldo Sy Piecco, Anatoly B Kolomeisky, Christy F Landes, A Two-Step Method for smFRET Data Analysis. J. Phys. Chem. B 2016, 120(29), 7128 - 7132 ( link ) ( pdf ) ( SI ) ( Matlab codes )
      An algorithm to greatly increase the accuracy of data analysis in single-molecule FRET (smFRET) experiments using the two-step fitting method. The idea is to compensate the camera blurring effect using Monte Carlo simulation. Major work was done at OU and Chen was the *corresponding author for the first time.

      News reports:

      Work has been selected in the Virtual Issue of JPC B on Biophysics .

      NQPI | Chen Enhancing Techniques for Molecular Structure Measurements , Ohio University News
    30. Selma Piranej, David A. Turner, Shawn M. Dalke, Haejun Park, Brittni A. Qualizza, Juvinch Vicente, Jixin Chen, Jacob W. Ciszek. Tunable Interfaces on Tetracene and Pentacene Thin-Films via Monolayers. CrystEngComm 2016, 18, 6062-6068 ( link ) ( pdf )
      A demonstration of using classical reactions to modify an organic electrodes. Collaborated with and led by  Prof. Jake Ciszek at Loyola University at Chicago .


      Work done before joining Ohio University:
    31. Jixin Chen, Yang-Hsiang Chan, James D. Batteas, Photo-Oxidation Kinetics of Thiol-Capped CdSe Quantum Dots. Work done before joining OU. To be submitted.
    32. David R Cooper, Drew M Dolino, Henriette Jaurich, Bo Shuang, Swarna Ramaswamy, Caitlin E Nurik, Jixin Chen, Vasanthi Jayaraman, Christy F Landes. Conformational Transitions in the Glycine-Bound GluN1 NMDA Receptor LBD via Single-Molecule FRET. Biophy. J. 2015, 109 (1), 66-75 ( link )
    33. Chen, J.X.; Poddar, N. K.; Tauzin, L. J.; Cooper, D. R.; Kolomeisky, A. B.; Landes, C. F., Single-Molecule FRET Studies of HIV TAR-DNA Hairpin Unfolding Dynamics. J. Phys. Chem. B 2014, 118, 12130-12139 ( link )
    34. Shuang, B.; Cooper, D. R.; Taylor, J. N.; Kisley, L. M.; Chen, J.X.; Wang, W.X.; Li, C.-B.; Komatsuzaki, T.; Landes, C. F. Fast Step Transition and State Identification (STaSI) for Discrete Single-molecule Data Analysis. J. Phys. Chem. Lett. 2014, 5 , 3157 - 3161 ( link )
    35. Tauzin, L. J.; Shuang, B.; Kisley, L. M.; Mansur, A. P.; Chen, J.X.; de Leon, A.; Advincula, R. C.; Landes, C. F. Charge-Dependent Transport Switching of Single Molecular Ions in a Weak Polyelectrolyte Multilayer. Langmuir 2014, 30, 8391-8399. ( link )
    36. Kisley, L.; Chen, J. X.; Mansur, A. P.; Dominguez-Medina, S.; Kulla, E.; Kang, M.; Shuang, B.; Kourentzi, K.; Poongavanam, M.-V.; Dhamane, S.; Willson, R. C.; Landes, C. F. High ionic strength narrows the population of sites participating in protein ion-exchange adsorption: A single-molecule study. J. Chromatogr. A , 2014, 1343 , 135 - 142. ( link )
    37. Kisley, L.; Chen, J. X.; Mansur, A. P.; Shuang, B.; Kourentzi, K.; Poongavanam, M.-V.; Chen, W.-H.; Dhamane, S.; Willson, R. C.; Landes, C. F., Unified super-resolution experiments and stochastic theory provide mechanistic insight into protein ion-exchange adsorptive separations. PNAS , 2014, 111 , 2075-2080 ( link ) ( Reported by NSF Science360, Rice News, Physics News, Phys.org, and etc.)
    38. Shuang, B.; Chen, J. X.; Kisley, L.; Landes, C. F., Troika of single particle tracking programing: SNR enhancement, particle identification, and mapping. Phys. Chem. Chem. Phys. 2013, 16 , 624-634 . ( link )
    39. Chen, J. X.; Bremauntz, A.; Kisley, L.; Shuang, B.; Landes, C. F., Super-Resolution mbPAINT for Optical Localization of Single-Stranded DNA. ACS AMI , 2013, 5, 9338-9343. ( link )( Reported by Rice News, Science Daily, and Novus Light )
    40. Chen, J.X.; Ruther, R.; Tan, Y.; Bishop, L.; Hamers. R. J., Molecules on ZnO surfaces: Molecular Adsorption on ZnO(10-10) Single Crystal Surfaces: Morphology and Charge Transfer. Langmuir 2012, 28 , 10437-10455. ( link )
    41. English, C. R.; Bishop, L. M.; Chen, J. X.; Hamers R. J., Formation of Self-Assembled Monolayers of π -Conjugated Molecules on TiO2 Surfaces by Thermal Grafting of Aryl and Benzyl Halides. Langmuir 2012, 28 , 6866-6876. ( link )
    42. Cai, Y. J.; Zhao, Z.; Chen, J. X.; Yang, T; Cremer, P. S., Deflected Capillary Force Lithography (dCFL). ACS Nano 2012, 6, 1548 - 1556. ( link ) (Highlighted in ACS Nano , 2012, 6 , 998)
    43. Chen, J. X.; Franking, R.; Ruther, R. E.; Tan, Y. Z.; He, X. Y.; Hogendoorn, S. R.; Hamers, R. J., Formation of Molecular Monolayers on TiO2 Surfaces: A Surface Analogue of the Williamson Ether Synthesis. Langmuir 2011, 27 , 6879-6889. ( link )
    44. Chan, Y. H.; Chen, J. X.; Liu, Q. S.; Wark, S. E.; Son, D. H.; Batteas, J. D., Ultrasensitive Copper(II) Detection Using Plasmon-Enhanced and Photo-Brightened Luminescence of CdSe Quantum Dots. Anal. Chem. 2010, 82 , 3671-3678. ( link )
    45. Chen, J. X.; Chan, Y. H.; Yang, T. L.; Wark, S. E.; Son, D. H.; Batteas, J. D., Spatially Selective Optical Tuning of Quantum Dot Thin Film Luminescence. J. Am. Chem. Soc. 2009, 131 , 18204-18205. ( link ) (Highlighted in JACS Select, an online collection showcasing significant recent publications in JACS; and Photonics Spectra news, an industrial magazine)
    46. Chen, J. X.; Liao, W. S.; Chen, X.; Yang, T. L.; Wark, S. E.; Son, D. H.; Batteas, J. D.; Cremer, P. S., Evaporation-Induced Assembly of Quantum Dots into Nanorings. ACS Nano 2009, 3 , 173-180. ( link )
    47. Chan, Y. H. ( co-first author); Chen, J. X. ( co-first author); Wark, S. E.; Skiles, S. L.; Son, D. H.; Batteas, J. D., Using Patterned Arrays of Metal Nanoparticles to Probe Plasmon Enhanced Luminescence of CdSe Quantum Dots. ACS Nano 2009, 3 , 1735-1744. ( link )
    48. Liao, W. S.; Chen, X.; Yang, T. L.; Castellana, E. T.; Chen, J. X.; Cremer, P. S., Benchtop Chemistry for the Rapid Prototyping of Label-Free Biosensors: Transmission Localized Surface Plasmon Resonance Platforms. Biointerphases 2009, 4 , 80-85. ( link )
    49. Shi, J. J.; Chen, J. X.; Cremer, P. S., Sub-100 nm Patterning of Supported Bilayers by Nanoshaving Lithography. J. Am. Chem. Soc. 2008, 130 , 2718-2719. ( link )
    50. Zhang, F. X.; Miao, S.; Yang, Y. L.; Zhang, X.; Chen, J. X.; Guan, N. J., Size-Dependent Hydrogenation Selectivity of Nitrate on Pd-Cu/TiO2 Catalysts. J. Phys. Chem. C 2008, 112 , 7665-7671. ( link )
    51. Liao, W. S.; Chen, X.; Chen, J. X.; Cremer, P. S., Templating Water Stains for Nanolithography. Nano Letters 2007, 7 , 2452-2458. ( link )
    52. Zhang, S. J.; Li, L. D.; Xue, B.; Chen, J. X.; Guan, N. J.; Zhang, F. X., Selective Catalytic Reduction of Nitric Oxide with Propane over Ni-Al2O3: Effect of Ni Loading. React. Kinet. Catal. Lett. 2006, 89 , 81-87. ( link )
    53. Guan, X. X.; Li, N.; Wu, G. J.; Chen, J. X.; Zhang, F. X.; Guan, N. J., Para-Selectivity of Modified HZSM-5 Zeolites by Nitridation for Ethylation of Ethylbenzene with Ethanol. J. Mol. Catal. A 2006, 248 , 220-225. ( link )
    54. Zhang, F. X.; Jin, R. C.; Chen, J. X.; Shao, C. Z.; Gao, W. L.; Li, L. D.; Guan, N. J., High Photocatalytic Activity and Selectivity for Nitrogen in Nitrate Reduction on Ag/TiO2 Catalyst with Fine Silver Clusters. J. Catal. 2005, 232 , 424-431. ( link )
    55. Li, L. D.; Xue, B.; Chen, J. X.; Guan, N. J.; Zhang, F. X.; Liu, D. X.; Feng, H. Q., Direct Synthesis of Zeolite Coatings on Cordierite Supports by in situ Hydrothermal Method. Appl. Catal. A 2005, 292 , 312-321. ( link )
    56. Li, L. D.; Chen, J. X.; Zhang, S. J.; Zhang, F. X.; Guan, N. J.; Wang, T. Y.; Liu, S. L., Selective Catalytic Reduction of Nitrogen Oxides from Exhaust of Lean Burn Engine over in situ Synthesized Cu-ZSM-5/Cordierite. Envion. Sci. Technol. 2005, 39 , 2841-2847. ( link )
    57. Li, L. D.; Chen, J. X.; Zhang, S. J.; Guan, N. J.; Wang, T. Y.; Liu, S. L., Selective Catalytic Reduction of Nitrogen Oxides over Cu-Ts-1/Cordierite and LaCu-Ts-1/Cordierite. Reacti. Kinet. Catal. Lett. 2005, 84 , 115-120. ( link )
    58. Li, L. D.; Chen, J. X.; Zhang, S. J.; Guan, N. J., In-situ Synthesis of Binderless ZSM-5 Zeolitic Coatings on Aluminum. Chinese Chem. Lett. 2005, 16 , 253-256. ( link )
    59. Guan, X. X.; Li, N.; Wu, G. J.; Zhang, F. X.; Chen, J. X.; Guan, N. J., Nitridation of HZSM-5 and Its Application in Ethylation of Ethylbenzene with Ethanol to Para-Diethylbenzene. Chinese J. Catal. (in Chinese) 2005, 26 , 634-636. ( link )
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    PATENTS

    • Guan, N. J.; Li, N.; Chen, J. X.; Zhang, F. X., Catalysts Used in the Alkylation of Ethylbenzene with Ethanol to para-Diethylbenzene and Its Preparation. CN1605390,2005.
    • Liu, Z. G.; Guan, N. J.; Chen, T. H.; Chen, J. X.; Wang, J. Z., A Method to Treat Bioundegradable Organic Wastewater by CuCl Membrane. CN03121025, 2003.
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